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Cell Theory (3 major points/ people)
- Theodor Schwann, Jakob Schleiden
- 1. All organisms are composed of one or more cells
- 2.The cell is the structural and functional unit of life
- Rudolph Virchow
- 3. Cells can arise only by division from a preexisting cell
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4 macromolecules
- Nucleic Acids
- Proteins
- Lipids
- Carbohydrates
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Requirements for formation of first cell
- •Organic molecules (carbon-based)
- •Molecules for catalysis of chemical reactions and self-replication
- •A barrier between the internal cell environment and the external environment
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Requirement 1: Organic molecules
•Spontaneous synthesis of organic molecules probably provided the basic materials from which the first living organisms arose.
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Requirement 2: Molecules for catalysis of chemical reactions and self-replication
RNA probably first genetic material is only molecule able to both catalyze chemical reactions (ribozyme), and self replicate (through nucleotide base pairing)
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Requirement3: a barrier between the internal cell environment and the external environment
•Phospholipids are the basic components of all present-day biological membranes, including the plasma membranes of both prokaryotic and eukaryotic cells.
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3 types of Bacteria
- •Archaebacteria
- •Eubacteria
- •Cyanobacteria
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Archaebacteria
were prevalent in primitive Earth and often live in extreme environments
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Eubacteria
a large group of organisms (including common forms of bacteria) that live in a wide range of environments, including soil, water, and other organisms (e.g., human pathogens).
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Cyanobacteria
the largest and most complex prokaryote, synthesizes its energy from photosynthesis.
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Nucleoid
- a single circular molecule
- Where the DNA of Bacteria is found
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Mitochondria:
in all eukaryotic cells, are the sites of oxidative metabolism
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Chloroplasts:
found only in cells of plants and green algae, are the sites of photosynthesis
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Lysosome
provide specialized metabolic compartment for digestion of macromolecule
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Peroxisomes
perform various oxidative reactions
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Vacuoles:
- variety of functions in plant cells
- -digestion of macromolecules and storage of waste products and nutrients.
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Endoplasmic reticulum:
- -an extensive network of intracellular membranes
- - functions in the processing and transport of proteins, and in the synthesis of lipids.
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Golgi apparatus:
- -sorts and transports proteins destined for secretion and serves as a site of lipid synthesis -(in plant cells)
- - synthesis of some of the polysaccharides that compose the cell wall
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cytoskeleton
- -provides the structural framework of the cell -responsible for the movements of entire cells, and intracellular transport / positioning of organelles and other structures
- -Composed of actin filaments, intermediate filaments, microtubules
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Yeasts
the simplest eukaryotes; more complex than bacteria, smaller and simpler than cells ofanimals or plants.
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Saccharomyces cerevisiae
- -commonly studied yeast
- - unicellular, but communicate between cells
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•Plant cells are organized into three main tissue systems:
- 1) ground tissue
- 2) dermal tissue
- 3) vascular tissue.
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Humans have over ___ distinct tissue types, organized into five main tissue systems:
200
- Epithelial
- Connective
- Blood
- Nervous
- Muscle
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Epithelial cells-
- form sheets that cover the surface of the body and line the internal organs.
- -specialized for protection, secretion, absorption
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Connective tissues
- bone, cartilage, and adipose tissue
- Fibroblasts .
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Fibroblasts
are a cell type that fill the spaces between organs and tissues in the body.
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Blood
- -contains red blood cells (erythrocytes) and white blood cells
- -red blood cells don’t have nucleus
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Nervous tissue
-composed of supporting cells and nerve cells, or neurons, which are highly specialized to transmit signals throughout the body.
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Muscle
3 types
- -responsible for the production of force and movement
- Skeletal, smooth muscle Cardiac muscle
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pros and cons of the model organisms used in the study of cells:
Bacteria/ E. Coli
- -relative simplicity and ease of propagation.
- •Divide every 20 min. under optimal conditions to produce clonal colonies.
- •Small genome 4.6 million bp, 4300 genes.
- •Ability to carry out biosynthetic reactions in simple defined media - useful in elucidating biochemical/genetic pathways.
- •Useful for DNA/gene cloning and manipulation
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pros and cons of the model organisms used in the study of cells:
Yeast
- -more manageable experimentally than the genomes of complex eukaryotes such as humans
- •Readily grown in the lab - divides every 2 hrs
- •studied by many of the same molecular/genetic approaches as for E. coli
- .•Yeast mutants - used to study fundamental processes in eukaryotes, - DNA replication, transcription, RNA processing, protein sorting, regulation of cell division.
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pros and cons of the model organisms used in the study of cells:
C. elegans (nematode)
- -is a relatively simple multicellular organism (959 somatic cells)
- •entire cell lineage known
- •easily grown and subjected to genetic manipulations in the laboratory
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pros and cons of the model organisms used in the study of cells:
Drosophila melanogaster (fruit fly)
- -easily maintained and bred in the laboratory
- -Studies of development, pattern formation
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pros and cons of the model organisms used in the study of cells:
Xenopus laevis -
- -early vertebrate development eggs develop outside mother
- -all stages of development from egg to tadpole can be studied in the laboratory.
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pros and cons of the model organisms used in the study of cells:
zebrafish
easy to maintain, reproduce rapidly, amenable to genetic manipulation, and have transparent embryos.
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pros and cons of the model organisms used in the study of cells:
Mice
- -easy to keep in lab, complete genome sequence
- - Often used as transgenic animals to study known human genetic disease
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Microscopy: light (bright-field),
2 pioneers
- •Robert Hooke invented the first simple light microscope in 1665.
- •In the 1670s, Antony van Leeuwenhoek microscope magnified objects up to 300 times-sperm, blood, bacteria.
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Microscopy: light (bright-field),
max magnification
- •The light microscope remains a basic tool of cell biology
- -can to magnify objects up to 1000X.
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Microscopy: light (bright-field),
2 lenses
Objective lens: adjustable lense just above specimen
condenser lense: focus' light source
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Resolution
-ability to distinguish objects
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phase contrast/ differential interference-contrast,
- •optical systems that convert variations in density or thickness
- -contrast that can be seen in the final image without staining.
- •Allows visualization of live cells
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fluorescence microscopy
- -widely used and very sensitive method to study intracellular distribution of molecules.
- -Fluorescent markers, dyes and proteins (eg. green fluorescent protein(GFP)) used to visualize proteins/structures in living cells
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green fluorescent proteins (GFP)
- -allowed visualization (without staining/killing) of specific molecules and structures in living cells
- -first isolated in jelly fish
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•The electron microscope-
3 pioneers
pros
- Albert Claude, Keith Porter, and George Palade -1940 and 50s.
- Achieve much greater resolution - wavelength of electrons shorter than visible light
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scanning Electron microscopy,
- •electron beam reflects off sample surface- coated with metal
- -provides 3-dimensional surface image
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transmission electron microscopy-
passes a beam of electrons through a specimen to form an image on a fluorescent screen.
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Biochemical: subcellular fractionation:
•Differential centrifugation:
separates and isolates organelles (size and density) for use in biochemical studies.
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•ultracentrifuge
effect?
-can rotate samples at very high speeds (over 100,000 rpm) to produce forces up to 500,000 times greater than gravity.
-The force of an ultracentrifuge causes cell components to move toward the bottom of the centrifuge tube and form a pellet at a rate that depends on their size and density
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Cell culture: primary cultures,
are the first cell cultures established from a tissue (limited number of divisions before death).
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immortal cell cultures
- embryonic stem cells or cells derived from tumors that may proliferate indefinitely in culture.
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•Media used for animal cell cultures contain:
serum, salts, glucose, amino acids and vitamins.
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